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Table 1 Clinical characteristics of TCGA HPV(−) cohort by NSD1 mutation status

From: NSD1 mutations by HPV status in head and neck cancer: differences in survival and response to DNA-damaging agents

 

Mutated NSD1, n = 60

Wild-type NSD1, n = 397

p-value*

n

%

n

%

 

Avg. age at diagnosis (years)

60.0

 

61.6

 

0.25

Sex

    

0.16

 Female

13

21.7

121

30.5

 

 Male

47

78.3

276

69.5

 

Race

    

0.59

 American Indian or Alaska Native

0

0.0

2

0.5

 

 Asian

0

0.0

11

2.8

 

 Black or African American

7

11.7

38

9.6

 

 White

50

83.3

334

84.1

 

 Unknown

3

5.0

12

3.0

 

Smoking History

    

< 0.001

 Never Smoker

2

3.3

99

24.9

 

 Current Smoker

32

53.3

129

32.5

 

 Former Smoker

25

41.7

158

39.8

 

 Blank

1

1.7

11

2.8

 

Alcohol Use

    

0.37

 No

15

25.0

134

33.8

 

 Yes

44

73.3

254

64.0

 

 Unknown

1

1.7

9

2.3

 

Stagea

    

0.15

 Stage I, II

9

15.0

97

24.4

 

 Stage III

19

31.7

81

20.4

 

 Stage IV

31

51.7

207

52.1

 

 Unknown

1

1.7

12

3.0

 
  1. *p-value is calculated from chi-square test for categorical variables or Wilcoxon rank-sum test for age (continuous)
  2. aStages assigned using AJCC 7th edition (76%), 6th edition (21%), 5th edition (2%), and 4th edition (< 1%)